1. Peakcon should derive its probability score based ONLY on those rules which contain overlapping residue i and i-1 information.

2. Double click of "Display Spectra" is re-drawing the screen twice and the second time is quite slow for macosx aqua.

3. Efficiency issues of the gui when there are lots of connections and no current chain.

4. Snb is very sluggish with lots of connectivities (eg, over 50000).

5. Peaklists which do not deal with the ringing problem will cause problems for peakcon and snb.

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