# 
#  This is the user's customized init file as created
#  by the smartnotebook Initialization process. 
# 
  
# This is the user's selected experiment type, 
# reference spectra, and spectral configuration type
set mySpectra(exp,type) hncacb
set mySpectra(exp,ref) hsqc
set mySpectra(exp,spec) 3
  
# Here is where we find the generic files for configuring the
# above experiment selection.
set mySpectra(fn,expInit,lib) /Applications/nmr/snb-v5.1.3/lib/experiments/hncacb/hsqc-3
set mySpectra(fn,nvInit,lib) /Applications/nmr/snb-v5.1.3/lib/experiments/hncacb/hsqc-3.nmrview
set mySpectra(fn,rulesdir) /Applications/nmr/snb-v5.1.3/lib/experiments/hncacb/hsqc.rules
set mySpectra(fn,searchItems) /Applications/nmr/snb-v5.1.3/lib/experiments/hncacb/hsqc.search
  
# Where do I find the input peaklists and processed spectra
set mySpectra(xpk,file,0) hsqc.xpk
set mySpectra(xpk,file,1) hncacb.xpk
set mySpectra(xpk,file,2) cbcaconnh.xpk
set mySpectra(nv,file,0) hsqc.nv
set mySpectra(nv,file,1) hncacb.nv
set mySpectra(nv,file,2) cbcaconnh.nv
  
# If there are imported atom assignments, where are they found
set snbVar(fn,ppm) 
  
# Output directory
set snbVar(fn,session) ./snb.out
  
# Web browser
set snbVar(fn,browser) /Applications/Safari.app/Contents/MacOS/Safari
  
# Applications defaults file
set snbVar(fn,defaults,user) ./snb.out/snb.defaults
  
# Version control file
set snbVar(fn,version) ./snb.out/VERSION
  
# The user can override the generic experiment defaults here.
set mySpectra(fn,expInit,user) ./snb.out/snb.hsqc-3
set mySpectra(fn,nvInit,user) ./snb.out/snb.hsqc-3.nmrview
  
# Shift constraints file
set snbVar(fn,shifts) ./snb.out/shifts
  
# Has user chosen to have snb generate connectivity files (0=no)?
set snbVar(parm,calcConnect) 1
  
# Location of the user submitted connectivities file
set snbVar(fn,submit) ./snb.out/con.submit.uxx
  
# Location of the final ppm.out file
set snbVar(fn,outppm) ./snb.out/ppm.out
  
# Location of the chains file
set snbVar(fn,chains) ./snb.out/chains
  
# Define a suggested chains file created by snb from assignments
# made in the reference peaklist.
set snbVar(fn,suggest) ./snb.out/chains.suggest